mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGAAGACTGCCGCTCGTTTTA GTGCGAGCGCGTATTAGTCTGC GAGGCTCGATAGAAGACTGCCGCTCGTTTTAAAGCACATGTTTAGAATCAGATCATGCCTTAGTGCGAGCGCGTATTAGTCTGCGACTCA 4 1 5' arm Schistosoma_japonicum 19997615 100 sja-mir-3494 2e-17 -27.9 (((..(((.((((..(.((((((((((.((((.(((...((((......))))..))).)))).))))))).))).)..)))))))))). (-27.90)