mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCTGTCGTTAGGAAACGGATT CATAGGTGTCTCCGAAGCATT ACTGGTCTTCGACCATAGGTGTCTCCGAAGCATTGCTCGAGTATCGTGGGACAACCAAGTGAGCAATGCTGTCGTTAGGAAACGGATTCGAAGAAAGG 4 5 3' arm Schistosoma_japonicum 19997615 100 100 -33.9 .((..(((((((..((..((.(((.((((((((((((((.......(((.....)))..))))))))))).)))...))).))..)))))))))..)) (-33.90)