mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGAGAATCTGTTGGATGTT CATCAAATATTTTGTCTGCT CGACCGCAAGACATCAAATATTTTGTCTGCTAGCTCTGCTAACTCTGATAAGGGAGTAGAGTTTACGGAAATGCTGAGAATCTGTTGGATGTTGTATGAAAG 5 0 3' arm Schistosoma_japonicum 20092619 100 100 -25.8 .........((((((.((((..((.((.((.(((((((((..((((....))))))))))))).........)).)).))..)))).))))))......... (-25.80)