mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCCAAGACGCGTCACGACATTT GTATCCTGGACGAATGTTTTGGAGG GACTTCGGATAACTGGAGTATCCTGGACGAATGTTTTGGAGGTTGCCAAGACGCGTCACGACATTTCAGGCAGTTCATGGATA 5 3 3' arm Schistosoma_japonicum 20092619 100 100 -24.7 ..((..((((..(((((((.((...((((...(((((((......))))))).))))..)).)))))))...))))..))... (-24.70)