mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCACTGCCTCTTCCCTGGCT CTGGGAAAAGGCAGAGCAAG GGCTGGGAAAAGGCAGAGCAAGAATGTAGCTATTGACAGAAATGGTGAAGTGAGAATGAGAGGAGAGAGATATCTGTTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCT 2 1 3' arm Phaseolus_vulgaris micropc MIR408 1e-19 ahy-MIR408 0.000000006 -44.07 (((((((((.((((((.(((.((.(((((((((.((((((.((..........................)).))))))))))))))).)).))).)))))).))))).)))) (-44.07)