mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGCTCAGGAGGGATAGC TATCCATCCTGAGTTT AAGCTCAGGAGGGATAGCGCCATGGATGATCCATCTTTCAAGCTTTCATGCATGTATGTTATTTGATCCTCATATAGCGCTATCCATCCTGAGTTT 1 0 5' arm Gossypium_hirsutum micropc MIR390 0.000000001 ghr-MIR390c 1e-49 -39.9 ((((((((((.(((((((((.(((((.((((...(...((.((......)).))...)......)))).)).))).))))))))).)))))))))) (-39.90)