mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGACAGAAGAGAGTGAGCTC GTTTTTACTCGTTTTTCTCGAT GAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCTC 2 2 3' arm Oryza_sativa pmrd 100 osa-MIR156d 0.00000000000003 -33 ((((..((((((.(((((.((((((((....((((((....))))))......((.((((((.....(......).((.(((....))).))..)))))).)).....)))))))).))))).)))))))))) (-33.00)