mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGGTAGATAGAACAGGTCTTG AGACCTACTTATCTACCAACA TCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGC CCGTTTGTGGNNCAATACGGCCATTATTGGCCGGGGGAAGGAGGGAGAAATTATGACCGAGAGCCTGACACCTGATGCTAGCGGCTTTTGTCTCGCCAAGTTGACCCAGTATTTGGCCACCTTGTGCGGCGGGTGACTATGGTGTCCAGGATTGGTGTCAGCAGAAAACCAACAGTGATGTGGTGGCACACAGTGAACTGACAGGACCCAGGCAGCAGCGGTTCTTTTGGTGGCAATGGTGCCATGTCATGGGTACTCTCCTTGCTGATGGCAGATACCGACAGGCAAACTGTTGCCTTGCGTTTAGCTCTGTTAACCATTGACAGTAAGGTAAGCATGTCTTCAGCGTTCATGGCTCTTAAAGATCTTGTCTGTAACACAAGGGTTTAAGACTGGGGTCTCATTTTGTTGTCCTGACTTAGACTTGGCAGTCCTCCTGCTTCAGCCTGCTAAGTGCCAAGATTACAGGGTTGAGCCAGCATGCCTAACTTCTAGTTTAGTTTCTTCAGACAGGGTCTCATGCAGCACAGGCTGGCTTTAGACTCGCTATTGAGCATAGGATTACCTTGAACCCTTGATCTTCCTGACTCTACCTTCTAAGTTCTGGGATTCCAGGCATGCTCAGTTAAAACAATAGGTGGATTTAGTCATATTCTTCTGGAGACTAAGACAATAGAGTCCTTGAAGTCAGGCTGACTCTGCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTNCCACAGTCTTCCTACAGAAGTGGGTGCAGTGAACTNCTTAGATGAGAANNGCTGGAAAGCCAGAGTGGCACAGTCTCTCTAGTGATAGAAGGTGCTTGNAGGTCANACAGGCGGTTAGAAAGTTGAGAACTTGTTTCCTTTATGCAG 4 1 5' arm Mus_musculus mirnest SCARNA15 9e-32 mmu-mir-1839 8e-35 -21.7 .............(((((((((...((((((((.((....))......))))))))..)))))))))............ (-21.7)