mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGGGCTGAGCTGGGGGCAT CGCCGCCCAGCCCAGCGCCCGAGC CCCGNACCCTTTTGGGGCTGAGCTGGGGGCATGCTCCAGCACCCCCAGAGCCTGGGAGCGAACCCAGGAGCGCCGCCGCCCAGCCCAGCGCCCGAGCGGCAGAAC GGTGCGCAGCGAGCCGGGGCTCCCGCTGCGCTGCACCGCGCTGATCTGAGTCCCGGGATATCTGCCGAGGGTCGCGTGCTGCCGGGGCCCAGCCCAGAGCCCACCGAGTGCCCGNACCCTTTTGGGGCTGAGCTGGGGGCATGCTCCAGCACCCCCAGAGCCTGGGAGCGAACCCAGGAGCGCCGCCGCCCAGCCCAGCGCCCGAGCGGCAGAACCACCGCTAAGGACCCCTTGAACCGTCGTCTCTTCCACCGAGGCAACCTCTAGGGTCGGCGACCAAAGTCTGGGTTTCTGAGAAAAGAGCCAGCGTGGGAACCCTGACTGGAACTCTTCTGGATTCCCAGGAAAGACCTGAGCCATTGCCTTTCTACCTTACCTGCCCCCCCAGGACTGGGCAGTTGCCAGAGGCCCTGGGGGGGT 2 2 5' arm Mus_musculus mirnest 100 100 -46.1 .......((.((((((((((.(((((((((.((((((.((...(((((...))))).)).......))))))..))).)))))).)))).)))))).))...... (-46.1)