mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATGAAGTGTGATGTGGATAT ATCCATCGAGACACTTTTCAC GGCATGGAGGTCTGTGGTATCCATCGAGACACTTTTCACTCCATCATGAAGTGTGATGTGGATATCCGCAAGACCTGTAT AATTCGGACCTTGGCGCTTCTTGCCGCTCCTCCGTCGCCGCCGCGTCCTTCGCCGATCGCAATGGAAGAAGAAATCGCCGCACTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCACGGCTTTGCTGCGANCGACGCCCCCAGGGCCGTGTTCCCTTCCATCGTAGGGCGCCCCCGACACCAGGGCGTCATGGTGGGCATGGGCAGAAAGACTCATACGTGGGTGACGAGGCCCAGAGCAAGAGGGGTATCCTGACCCTGAAGTACCCTATCGAACACGGCATTGTCACTAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCTCCTGAGGAGACCCGGTGCTTCTGACCGAGGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGATACTGTTTGAACCTTCAATACCCAGCCATGTACGTGGCCATTCAGGCGGTGCTGTCCTTGTATGCATCTGGGCGCACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACACACACAGTGCCCATCTATGAGGGCTACGCATTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGGCGGGACATGACAGACTACCTCATGAAGATCCTGACTGAACGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATCGTCGTGACATAAAGGAGAAGCTGTGCTATGTTGCGCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCCTTGGAGAAGAGTTACGAGCTGCCCGACCGCCTNGNATCACCATTGGCAATGAGCGGTTACGGTGTCCGGAGCACTCTTGCAAGCCTCCCTCCATGGCATGGAGGTCTGTGGTATCCATCGAGACACTTTTCACTCCATCATGAAGTGTGATGTGGATATCCGCAAGACCTGTATGC 5 1 3' arm Mus_musculus mirnest 100 gga-mir-3533 0.00000000006 -25.3 ...(((.((((((((((((((((.((..(((((((............)))))))..)))))))).)))).)))))).))) (-25.3)