mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAGTTCGAGGCCAGCCTGGT CAGGACAGCCAGGGCTACAGA AGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTGCCAGGACAGCCAGGGCTACAGAGAGAAACCCTGTCTCCAA ACAGGCAAGCTGGGCTTTGAGGAGTTCAAATACCTCTGGAACAACATTAAAAAGTGGCAGGTAAGTGGTAGCCGCTGAAACTCCCAGGATCTGATCCCCCAAGCCATGGGGACCCCATGCTCCATGATGCTTGGTCCGACTGTTGTCTTTTCTATCCTTAGGCTATATACAAACGCTTTGATACTGACCGATCAGGGACTATCGTTCGCCATGAACTTCCAGGGGCCTTTGAGGCAGCAGGTGTGCTGGCAGGGGGTGATGATGGGCAGGGGATGGGGTGAGCAAAGTCACACCGTCACTGTACTGGAGATTGAGAAGTCCTGTGTGAAGCCGGGCATGGTGGCGCACGCCTTTAGTCTCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTGCCAGGACAGCCAGGGCTACAGAGAGAAACCCTGTCTCCAAAAAACAAAAAAAGAGAAGGGCTGTGTGCTGNGGCCCTGAGAACCAAACCGTTTTTTGTTTGTNTTGTTTTTGTTTGTTTTGCTAGGAATTCCACTGAATGAGCATCTCTACAGCATGATCATCCGGCGCTACCCGATGAGAGCGGGAACATGATTTCCGATACTTCATAAGCTGCTTTGTCAGGCCAGATGCCATGTTCGCGCTTTAAATCTCTTGGCAAATGGCAC 4 2 5' arm Mus_musculus mirnest mir-1937 0.00000002 mmu-mir-3470b 4e-25 -34.5 .....((((((((....(((((((((((..(((...((((((((........)).))))))...))).))))).)))))).....))))))))... (-34.5)