mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGTGGGACTTGTAGTTCGGTC CTGAACTGCAGTTCCCATCATG GGCCTGGGGCGCGGTGGGACTTGTAGTTCGGTCTTCGCTTCGGACGCCCAAGTCTGCATAGCGCGTGGTACGGCTGAACTGCAGTTCCCATCATGCCCTGNGA TTCGCTCCCGCGCTAGAGAGAAACATGTATCGTTTCCGCTCGCAGCTCTTCACGGGGATTTCTGCTGCTGCTGCTGCCGCTTCTCACCCGCGCCGCTCCTCGCCTCTCTTGTTAGCCCGAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAGACAGTGCAGCTCCATCGGCTGATCCTCGCTGAGCTCCAAGTGTAGGCGGCACCGGGCGGCCCACGATGCCGAAGAACAAGAAGCGGAACGCTCCCCACCGCGGTGGCGGGGGTGGCGGCGGCTCCGGGGCAGCGACGTCGGCGGCCACGGCAGGTGAGGGGTGTCCCCACGCCCGGGAGCCGGCTGGCCGGCCGAACGGGAGACCCCGGCCTGGGGCGCGGTGGGACTTGTAGTTCGGTCTTCGCTTCGGACGCCCAAGTCTGCATAGCGCGTGGTACGGCTGAACTGCAGTTCCCATCATGCCCTGNGACTCGCGCTTCTTGAGCTGGCACGCGGGAGCAGTGCTGGAGCTCCGGCCCTGGGGGCGGNGAGAACTGNGACCTTGGGCCGGAGGGAGAGTCAGAATANGGGTGACCNAGACTTGGCGTTCTTCCTAGACGTCGCTGCCTGCTGTCCGGTTCTTTATCGAGCTAGAGATGGGGCGGAGCGCCNGTGGGCTGCCGCTGNTGCC 2 0 5' arm Mus_musculus mirnest 100 mmu-mir-1938 3e-50 -48.1 .....((((((.(((((((.(((((((((((((..((((.(((((......)))))...))))........))))))))))))).))))))).)))))).... (-48.1)