mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTGAGTCCCGGTCGCGCGG GTGCGCCGGTGCTCAGTCG AAGCCTGCGCCGGAGCCGGGGTCTGAGTCCCGGTCGCGCGGGCGAGGAACTCATTGAGTTGCGCGTGCGCCGGTGCTCAGTCGGCCCGGCTCCGGTACTCC AATTGGCACTAGGAAGAGTGCTGGCGACGCCTATGAACCTCGGGCGGCGGCTGTAACTACAGTTGTGCCCCTGTCTCGGCTCAGAGGCCTCCAGGTGTGTTTTCTACCGAAGCCCGCGGCATCCAAACCGGCGCCGGCGGAATTGCAGATGGAGACGCCCATCCAGCGCGAAATCCGCCGCAGCTGCGAGCGGGAGGAAAGCCTGCGCCGGAGCCGGGGTCTGAGTCCCGGTCGCGCGGGCGAGGAACTCATTGAGTTGCGCGTGCGCCGGTGCTCAGTCGGCCCGGCTCCGGTACTCCGCTGCCGCGCGCCCTGGAGCGTNACGGGCGGGCGCGAAGATGCAACGGGACATCGAACGCGAGGCTCACAGGCAGGCGGCGCTGGCGA 3 1 5' arm Mus_musculus mirnest 100 mmu-mir-1199 8e-48 -55.5 ........((((((((((((..((((((.((((.((((((.(((....((((...))))))).)))))))))).))))))....))))))))))))..... (-55.5)