mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGCGTCGTCTTCGCTCCCGA GGGACCGGAAGCCCCCGCCGCT GCTTCCTTACGGCCGTGGCGTTCCTAACGGTCGGCGTCGTCTTCGCTCCCGATGTCTTCGGCTCGGGACCGGAAGCCCCCGCCGCTGCCGTCACCGCGGCCAAGCTCTGCCATC CGTATAGCTTCTCTCTTCTTTCCCCATCTACCGAACCCTAACCCTAGATTCGCCCTCGGAGCTTTCCGATGGGTTGGTCGACTCGCTTCCTTACGGCCGTGGCGTTCCTAACGGTCGGCGTCGTCTTCGCTCCCGATGTCTTCGGCTCGGGACCGGAAGCCCCCGCCGCTGCCGTCACCGCGGCCAAGCTCTGCCATCTCCTAGCCTTCGCCACCGCCTGGGGCGCCTCCCTTTGGGTCACCTTTATCGGTGGCATTATCATGTTCAAGTATTTGCCGAGGCACCAGTTCGGCAATCTACAAGGCAAGATGTTCCCCGCCTACTTCAAGATGGTTTCTGTGTGTGCGGCGATTTCGGTGGCTGCGTTTGCTTATCTCCATCCGTGGAGGTCGGCCTCAACAATAGAGAAGTATCAACTTGGTTTTCTCCTTTCTGCGCTTGGTTTTGACCTTTCCAACCTGATTGTCTTCACCCCGATGACTATTGAGATGATGAAGAAGAGGCACAAAGTTGAGAGGGATCTAAACATTGGCGATGAAGTCGGAGTGTCAAAGAACATGGAAGCGGCAAAAACCAATCCACAGCTCAAATCCATGAACAAGAAGTTCGGAATGATTCATGGCTTGTCATCACTAGCCAACATCATGGCCTTTGGCAGCCTGGCCATCCATTCATGGTACTTGGCTGGCAAGCTCCATTTCTGAACGAAAGAAAA 4 1 5' arm Curcuma_longa mirnest 100 100 -42.4 ..........((((((((........((((((((((..((.((((.((((((.(((...))))))))).)))).))...)))))..)))))..))))))))..((...)).... (-42.4)