mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGCTTCTTTACAGTGCTGCCT CAGCATTGTACAGGGCTATGA CCACCTCAGCAGAGCTGTCTTCGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACCAAGAATGGGCTGCCCTTAGG TGGGGTAGACGTTGAAATTTGAACTTTACACTCTTCAGATTCCTCCTCCTCTTCATTGATTGTCCTCCCATTCCCCACCATACTCCTTGTCTCTTCCTGAAGATAAGCACTACTGCAAGAGGTGAATGGTTTCTTTGAGGAGACTCTAGAGGGGGCCAGGAAGAAGGCCAGTCTTGAGCTAGTGATGGGATGAATGACGGGTCACAATGGTGACTAGACGCTGTGTTTGCTGGGTGCTGTTGAGGTGTGGACAGGAAGCCACAGGAAGCCACTGGAGCTGGGAGAAGACTGAGCGGTCAGAGGAAGGCCCACCTTGGTTCTTCTCCACCTCAGCAGAGCTGTCTTCGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACCAAGAATGGGCTGCCCTTAGGG 4 1 5' arm Mus_musculus mirnest mir-103 1e-34 mmu-mir-103-2 1e-43 -36.8 ...(((.((...((((.((((.((.((((((..((((.(((((((((((.(((..((......)))))))))))))))).))))...)))))).)).))))...))))...)).))) (-36.8)