mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACCCGTCCCGTTCGTCCCCGG GGGAACGTCGAGACTGGAGC GCAGCCCCGGCCGCCGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTGCCCCGGGAACGTCGAGACTGGAGCGCCCGAACTGAGCCACCT CCTCGTGCCGCGGGGAGCGCTCCCCTCTCGCCGCTTGCCTTGCCCGGCGCAGCCCCGGCCGCCGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTGCCCCGGGAACGTCGAGACTGGAGCGCCCGAACTGAGCCACCTTCGCGAACTCGGAGCGCGGCGGCCCGACTCAACCGCGGAGGCGCCCGGACGCGTAAAGTCAAGGCCTCAACCCGAAGGCAGCGCCTAAGAATCGCACTCCCTAGAATGCTCCAGCACTCACAGGGGCCTTCTCTGGGGTAACGGGACCCCAGCCGGATACTACAGCTCCAGCTGCTTGCGTCCCATGCATCGCCCTCTCGGGAGAGACCAGCTACCTAACTTTCTCTACCAGAGACCGCGCTGGCGTCTCGGGAGGGATGCTCTGCCCAGGGAGTCCCTCGGTCGCGGGACCTGTGGCCGCCAGAGCAGCTGGATCTGGAGTGTGCTGCCTGTGAACAGCCTGTGAAAGTGGCTCTTCTCCCTCTGGGTCAGAGGATGTCTCTGCTCTGGGGG 5 1 5' arm Mus_musculus mirnest 100 hsa-mir-1247 2e-45 -39.4 ........(((((.(((((((.((.(((.((..(((.(((((.....((.....)).))))).))).)).))).)).)))))))...)).))).... (-39.4)