mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATGAAGAGGAGTTGGAACTTA AGGAATGGCTCTTCTTATGGC AAAGGAATGGCTCTTCTTATGGCGGAATTTGATAAGGTTAATAAGAAGCTTGGAGTTCGTAGGGAAGATCTACCAAAATATGAAGAGGAGTTGGAACTTA 7 0 3' arm Populus_trichocarpa_x_Populus_deltoides pmrd 100 100 -21.6 .(((...(((((((((((...(((((......((((.((......)).))))...))))).((.........))........)))))))))))...))). (-21.60)