mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAAGAAGACTTGGAGCTTCGA AGAGTTCCTCC TGAAGAAGACTTGGAGCTTCGACTTGGACTGGCAGTTACAGGAAGGACATCAGCAGAGCACAATCCCCGTCGCAGGCATGGTAGAGTTCCTCC 15 0 5' arm Pinus_taeda pmrd 100 100 -18.1 ............(((((((...(((...(((.......)))..)))..((((((...((((.......)).))..)).)))).)))))))... (-18.10)