mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAAACCCCAATTACTTTTGC AAAAGTAATTGCAGCTTTGG TTAGGTAGGTGCAAAAGTAATTGCAGCTTTGGCCACTAAAAGTAATGACAAAAACCCCAATTACTTTTGCACCAACACA GTCCCACATGTGATAAAGGAACAGAAAGGGAGTTTTCTCTGTACCCACAGACCTTCCGTGCTGAGTGCTCTTTGATCCTGAGTGTCCTGTCTCCATGCTGATCACGTCCCTCCAGCCTGAAGAATGGCTTTTATTAGGTAGGTGCAAAAGTAATTGCAGCTTTGGCCACTAAAAGTAATGACAAAAACCCCAATTACTTTTGCACCAACACAACCTAATAGCATTTTTTATACTGCTGGCTGCTGCCCACAGATTGTTTCCATTTTCTTTTATCTGCATGTGTTTCACTTTGCTTTTACCCTTGAAGGATATTTTCAGCAGACACAGAATTCTCGGCTGGACGTGGTGGCTCATGCCTGTAATCCTAGCACTTTGGGGGGCCAAGGCGGGAGATCACCTGATATCGGGAATTCAGCTTGGCCAACATGGTGAAACCCTGTCTGTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGCGCATGCTTGTAATCCCAGCTACGTAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACATCGCTGCACTCCAGCCTAGGTGGCAGAGTGAGACTCTCTCTCAAAAAAAAAAAAAAAAGGGGC 4 1 3' arm Mus_musculus mirnest mir-548 5e-18 hsa-mir-548h-1 0.00000000000002 -24.5 ....((.((((((((((((((((....((((..((.((....)).)).)))).....)))))))))))))))).))... (-24.5)