mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CATAAAGTAGAAAGCACTAC ANTGTTTCCTACTTTATGGA CAGACAGACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTANTGTTTCCTACTTTATGGATAAGTGCACTGTGGGCTT AAGAGGCTCATCTGGCGCCATGTTGAGTCACCACCCACAAGGCCCAGGGCGGGCCCTCTAGGGGGCCACAGGCAGGGTGGAGCGGTCCCTGGGAAGTTACACGGAGGGGAGGGGGCAGGGGCCTTTATTAAAGCANGAGTCGGCAAAAAAAGCAAGTGGCCTGAAGAATCCCCGTGGACAGACAGACAGTGCAGTCACCCATAAAGTAGAAAGCACTACTAACAGCACTGGAGGGTGTANTGTTTCCTACTTTATGGATAAGTGCACTGTGGGCTTCAAAGACCACACCACACCACAGCCCCCTACCACCATCCTCCACTCCAACATCAA 2 0 5' arm Mus_musculus mirnest mir-142 8e-39 mml-mir-142 1e-37 -30.9 .......((((((((.....(((((((((((.(((((.(((...((....))......))).))))).))))))))))).....))))))))...... (-30.9)