mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGGTAGTTTCCTGTTGTTGG GACAGCACGACACTGCCTTCA ACGCCCGCAGCATCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCATCTCCAGGTA GGGCTCTTCGTTGCTGTCCCCTGCGTTTTCTGGTCGTCCAGGGAGGCTCTGTTTGGCAAAGCTGCAGAATCTGGGGAACCCGCCTCACACCGCTGGGTCTCCCCCCCCCCCCTTCTAGTTTTTTCCCCCTTCCTTTTTATTTCCTCCCTCTTTCTCGTCCCCCTTCCCTCCTTTTCACTCTCTCCTCCTAGGCGTACCTTTCCGGAGCCTGGAGCCCTCTTCATCCACCATGGGGTTAGGGTGGTGTCTGGTACAGGTTGCGGAGGAGGGCTCGACTGGGCACAATCGCAGGGCTCTTTCCTTGGCGGCGACAGTGGCAGCATCGGAGGCGGCGAGGGGCGAGGCAACCCTACGCCCGCAGCATCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCATCTCCAGGTACCTGTCCAGAGCAGCCCGGGATGGCTAGGCGGGCCATCAAGGCCTAATCGTGCCAGGCCTGCGGTGGCAACCTCAGATCCCCATGTGCAAGAAGAGCTTCTGGTCTTCCTCGGCGCTGTGCCACCCAACCCGCCTTACTGTTTCCGCCCGGCACCTTGGCCCGAGCAGGTACATTCAGGTTAGCGGCTG 3 0 5' arm Mus_musculus mirnest mir-196 2e-39 mmu-mir-196b 6e-43 -37 ..((.....)).....((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))....((........)). (-37)