mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGAGGTATAGCGCATGGGAAG TCCTATGCATATACTTCTTT ATTCTCGCTGGCTGTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGCAGTGAGATCTTC GAGGACTTCACCGAGCAACAGCCAAGTCCTCTGACACTGCTTCCAAGCTCTGTCTCATTCTCAGGCCAATAGCAGTCTGGACCCAGGGGATCAATCCTTCTGGTGACTGCTGCTGCTTGGAAGTATCAAATGATGGCCCGCACATTCTCGCTGGCTGTTCCTTTTTCCTATGCATATACTTCTTTGTGGATCTGGTCTAAAGAGGTATAGCGCATGGGAAGATGGAGCAGTGAGATCTTCCCCACCCAAACAAAGTCATTAGCATCTGCTTCCTGACCAGGCGACTTCTGCTTCCCTTCCACTGGGCCTGGGGCTGGGCGCTTTCCTGTCTGCTCGGGGCACTGTAAGAGAAGTAG 1 1 3' arm Mus_musculus mirnest mir-202 4e-25 mmu-mir-202 3e-35 -41.7 ..((((....((((((((.(((((((((((.(((((((((((..((((...)))))))))))))))..))))))))))).))))))))))))..... (-41.7)