mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGACAGAAGAGAGTGAGCACA TGCTCGCTCCTCTTTCTGTCAGC CTTATACGGCCCTGGAGAGATTGACAGAAGAGAGTGAGCACACGGGGCGGCGGTCGGCACTGGACGTGTGTCGTCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCCTCTCTCTTGTCCAAGGC CGCGCCGGGGAAGCTAAAGCTAAGCCCAGGTACATGTCTCCGTCCCATCATCTCCATCCTCTCCTATACCAAGGAAAACCGGTACACCATCAGATAGATTCTTCTCTCCTCCCGGTGGCCGCCTCCTACCTCAAGTACGGCCGCCGCCGCCGCCGCCGCCGCGCGAGCTCACCGGATCCAAGAAGGACCGACTCATCTCCCAGCTGCTGCTACATGTTTCGTTTGCGTTTTCTCTAAACTTGGTTTCGTCAGTGCTTATACGGCCCTGGAGAGATTGACAGAAGAGAGTGAGCACACGGGGCGGCGGTCGGCACTGGACGTGTGTCGTCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCCTCTCTCTTGTCCAAGGCCAGGAGTGGGAGTACCATCCATCGGTGTGGTGGCAGGCGCCACTGGCTGCCTGACCGGAGGAGAGAGACAAAGGAAGAGAGGCTTTCTCTGTAGCGTGGTGGAAATCGTGCCGCGCAGCGATGGATGGACACGCATGCTGCGCCAGACCGCTGGCTTTTGCAGCGCAAGGACATGTCACCTCGTTATCTTCTAGATATACGCATGGATTTGCAATATTTTTTGCTCTCAATTTGATCTGTTTCAGGCAGGCTGTCGGGGATCAACTAGCTCCTACCGAGGACGATGAGGAGGCTGCTCAGCTGCTGATACCGATGCCACGGCATGGAGTACTTCTACAACGAGAGTATTCTTCCAATGTGTACTACTGCAAACTGAAAATGACAAGATTTTTTTCTATTCATTTATGAATAGTANGCAGAGATCGTGACCTTAATTTCTAGGAAGGGAGGTCACTTGTTTTCAGTTCCTTGTGT 2 2 5' arm Cynodon_dactylon mirnest mir-156 3.0E-14 sbi-MIR156e 8.0E-27 -57.6 .......(((...(((((((((((((((((.((((((((((.....(((((((.((((((.......))))))...)))))))))))))))))...))))))))))..))))))).)))...... (-57.6)