mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCTGGAGCGCGGCGGAGGT TGTCCCCTGACGCTCCAGCCTCC GTCGCCCAACATGGCTGGAGCGCGGCGGAGGTGAGCCTGCTGTCCCCTGACGCTCCAGCCTCCTGCGCCCG CGTACTGCCTGCAGCCGGGCAAGCATTGGCCGCGGCGCTCTCACAGCACAGCCCGCCAGCGCGCACCGGCTGGTCGCCTTCGGGCGTGGGCAGCGAGAGCCGGCACCCCTCCCCCGCGCCTCCCGGCCAGCCGCGCCTGGCAGTGCCCGCCGAGGGCAGGGCGGGGCACCGGCCGGACAGCACGGCCGCGGCTGACGCAGTGCGGGGCCGGCAGTCGGGAGAGCCCGGGCGGGCGTGGAGCCTCTAGCCCGGCCGTCGGCAGGCCGCGTCCCCACCGGAGGGGGCTGGGCGCTCTCGCCCGGTCCGCAGGAGGCCGCCGGCGGCCTGCGGGTTCTGCCGCCGCCGCCGCCGCCGCGCTCGCCATTCACTGCGCCTCGTCTCCGCCCCAGTGCTGGGGGCTGAGCGGGGGAGAAGGGGCGGGCGCCCGCGAGCGGTGAATCACCTCCTCCTCCTCCTACCTCAGCGCCGCCGCCACCTTTCCATTCAGTCGCCCAACATGGCTGGAGCGCGGCGGAGGTGAGCCTGCTGTCCCCTGACGCTCCAGCCTCCTGCGCCCGAGCGCCGCGGCTGCGGCGGCGCCTCAGTTCGGCGGTGCGGAGGCCCAGGGGCCCGGTTGTAGCTCAGCGCCGGCATGTGGGGCGCCCCGGACGAGAGCTCGGTGCGAGTGGCTGTCAGAATAAGACCACAGCTTGCCAAAGAAAGGATTGAAGGATGCCATATTTGTACATCTGTCACACCAGGAGAACCTCAAGTCTTCCTAGGGAAAGATAAAGCTTTCACTTTTGATTATGTGTTTGACATTGACTCCCAGCAAGAGCAGATATACACTCAGTGTATAGAAAAACTAATTGAAGGTTGTTTTGAAGGATATAATGCTACAGTTTTTGCCTATGGACAAACTGGAGCTGGCAAAACATATACAATGGGAACAGGATTTGATGTTAACATCATTGAGGAAGAACAGGGTATTATTTCTCGTGCTGTTAAACACCTTTTCAAGAGTATTGAAGAAAAAAAACATGCTTCAATTAAAAATGGACTTCCTTCTCCAGATTTTAAAGTCAATGCCCAATTCTTAGAGCTATATAATGAAGAGGTTCTTGACTTATTTGATACCACTCGTGATATTGATGCAAAAAATAAAAAATCAAATATAAGGATTCATGAAGATTCAGCTGGTGGAATTTATACTGTGGGCGTCACAACACGTACTGTGAATACAGAATCAGAGATGATGCAGTGTTTGAAGCTGGGTGCTTTATCCCGGACCACTGCCAGTACCCAAATGAATGTCCAGAGCTCTCGCTCACATGCCATTTTTACCATTCACTTGTCTCA 2 2 5' arm Sus_scrofa mirnest 100 bta-mir-2428 0.0000000000009 -29.2 ...((.((....(((((((((((((.((((((......))).))).))).))))))))))...)).))... (-29.2)