mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTGGGATCTTTAGTTGTGGC CACACGTGAGATCTATAGTT CTTTTTAGTTGCCACACGTGAGATCTATAGTTCCAAGATGTGGGATCTTTAGTTGTGGCATGCAAACT GCGGCCGCTTTTTTTTTTTTTTTTACTTTTTTTTTACCTTTATTATTTATATATTTATTTATTTGCCTGCACTGGGTCTTAGTTGCAGCATGCAGTATCTTTTTAGTTGCCACACGTGAGATCTATAGTTCCAAGATGTGGGATCTTTAGTTGTGGCATGCAAACTCTTAGTTGTGGCATGTGGGATCTAGTTCCCTGACCATGGATTGAACCCGGGCCTCTGCTTTGGGATCATGGGAGTCAGCCACTGGACCACCAGGGAAGTCCCACTAATACTGCTGCTGCTATGTTGCTTCAGTTGTGTACACTCTGTGCAACCCCATAGACAGCAGCCCACTAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATGTCCTTCTCCAGTGCAGGAAAGTGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCATGGACTGCAGCCCACCAGGCTTCTCTGTCCATGGGATTTTCCAGGCCAAGGGTACCGGAGTGGGGTGCCATTGCCTTCTCCAAGGGGGGGGGGG 5 1 3' arm Bos_taurus mirnest 100 bta-mir-3432-1 0.0007 -19.6 .........((((((((..(((((((...(((....)))...)))))))..).)))))))........ (-19.6)