mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCTCAGTTCAGCAGGAACA TGCCTACTGAGCTGATATCAGT ACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTTACACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGC GATGGGGCCAGTTAAGGTGGAGCTGCTGGGGCAGAGGCCGCTGCTGAGCGGTCAGCTCGGGGCCAAGCAGGATTCTGGAGGATAAGGGCCCGCCTGGCCCCAAGGATGCACTTTGTCCTGTTATGAATGCAAACATTCCCGAAGTCTACAGAAATATAAATCCACTAAGTAAACATCTGTCTGAAAGTTCAAATGTATTGAAAGCTGCAGAATTATTAATTTTAAAAATCTAAAACCAAACGAATCATAGAAATTAAGTAAGACTGTGTCAGCAGCAGATGACGTGTGAGTAGAGCCGGGTACTTTCAAAGGAGACGTCCTCTTGTGATTTCCGAGCGCGGTGAACTCTCTCTTGTATTTGCAGTCCAGTCTGTGTCTTCTGCAGCGCCAGTGGAACGAGGCCGAGCGAGCTCCCAGCCGAGGCGCCGCTTCTCCGGGCTGTCAGTTGGACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTTACACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGCCCTAGAGCAAAGCCTTCCTGTTTGTAAGTGCCCAGAGGCCTGGGAGCTGGGACTGCAGCTGCGTGAAGACCGGCCCGAGTGCCCGCAGCAGAGCTGACCGGCAGCGGTGGTGGCCCCTCTGTATGTGTCCTGTGTGTGGGTGTCGGTAGAGTCAGAGTTCTGTTGACACAAGAGAAATGAGCTTCCACCCAAAAAGGCAGAATGCTGTTAGCGCCATGCGTGTGACGTGGGCAGCGCCCACCTCTGTCATGGTGTACTGGCCAGAAAGCAGGCGGAGCGACTGCGGGTCTGAAACAGGCCGCCTCTCTAGTATCTGTCCTGTGAATGAAGCCCAAGTTACAGCCACCGGCTTTCACAGCCGTGTGAGAGCGAAGCAAATGACACACGGTGCAGCTGTAAAGCCCATTCTCAGGGCTGTGAGATGCGCCCTGGTCTCTCCCTGTTCTCCGCTCATGGTCCTCTCTCCAAAGCTGAGAGCAAAGGTTACTTGTTTACAAGAATTCCTCCGTTGTGACCTGGCAGTAAACTTTATTGCTGTTTCCTTTGCAGGAAAGATCACAGCGAGAATCTTTTTCATGCATCTGC 4 1 3' arm Bos_taurus mirnest mir-24 6e-27 hsa-mir-3074 9e-41 -25.5 ...((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))... (-25.5)