mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGCTGCCAGTTGAAGAACTG GTTCTTCAGTGGCAAGCTTTA GAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTC TGGACGCCGCCAGCTGATCGGAGACTGGAGCCGGTGTGTGCTGGGCGCTGGGAAGAGACAGCGCCGCCGGCCGTGGGGATCGGACGCACTGATTTGCTCCCCTACCCTCAGCAACCCCCCCCACCCAGCACCAGGAACCTGTGCCTCCCACATCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAAGAAGAGGAGAAGGAGCTGCTTTCCCCCTCTGGAAGTGTCTTCATCCAGCCTTGGGTACATGGCTCTGCCATCCTCACCCTTCATGGAGCAGAAATGAGGAAGAACAGCCTGAAAACACAGAGGCAGACAGAAGACCAGTGAAGGACCAGGCCTGGAGAGCACAGGGCCCTGTCTGGACATCCTGCAGAGGGGGGCCCGTAGAGGCCAGGAGTGCCCCCAGGAGGAGGGAGGACAAGCCACCGTCCATCGAAGACAAGCTTCCAGCCGACTACTTCATTCTCCATTCCTCTCCAGTCTTTCTGCCTCCCTCAGAGACGTGGGACCATGTTGAAGTGTCCTTGACTTCATCCTCCTGCTCCCACCTCTCCTCACCATGTAATTTGTCTATAAGCACCGTAGAGGAGCAAGAGCCAGCTGTGAAAGGACATATGCAGAAAATTCATAAAAGAAATTCCGATAGATAAAACCATGGAAAAAGGTGTGCTTCGTTAGTAATTAAAGAAAGGCAGCTATAGCTGGAAGCATTTTTTCCTGTAGCCAACTATAAGAGGAAAAACAAGACCCAGTTATTGACAAAGAAGTACTAAAATGACACTCTCATATGTTGCACATGGGTATACAAGTGGGTAGTCTTACTGATGTCAG 0 2 3' arm Bos_taurus mirnest mir-22 4e-37 eca-mir-22 2e-38 -29.3 (((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))) (-29.3)