mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGTTCTTCAGTGGCAAGCTTT AGCTGCCAGTTGAAGAACTGT TGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCT TGGACGCCGCCAGCTGATCGGAGACTGGAGCCGGTGTGTGCTGGGCGCTGGGAAGAGACAGCGCCGCCGGCCGTGGGGATCGGACGCACTGATTTGCTCCCCTACCCTCAGCAACCCCCCCCACCCAGCACCAGGAACCTGTGCCTCCCACATCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAAGAAGAGGAGAAGGAGCTGCTTTCCCCCTCTGGAAGTGTCTTCATCCAGCCTTGGGTACATGGCTCTGCCATCCTCACCCTTCATGGAGCAGAAATGAGGAAGAACAGCCTGAAAACACAGAGGCAGACAGAAGACCAGTGAAGGACCAGGCCTGGAGAGCACAGGGCCCTGTCTGGACATCCTGCAGAGGGGGGCCCGTAGAGGCCAGGAGTGCCCCCAGGAGGAGGGAGGACAAGCCACCGTCCATCGAAGACAAGCTTCCAGCCGACTACTTCATTCTCCATTCCTCTCCAGTCTTTCTGCCTCCCTCAGAGACGTGGGACCATGTTGAAGTGTCCTTGACTTCATCCTCCTGCTCCCACCTCTCCTCACCATGTAATTTGTCTATAAGCACCGTAGAGGAGCAAGAGCCAGCTGTGAAAGGACATATGCAGAAAATTCATAAAAGAAATTCCGATAGATAAAACCATGGAAAAAGGTGTGCTTCGTTAGTAATTAAAGAAAGGCAGCTATAGCTGGAAGCATTTTTTCCTGTAGCCAACTATAAGAGGAAAAACAAGACCCAGTTATTGACAAAGAAGTACTAAAATGACACTCTCATATGTTGCACATGGGTATACAAGTGGGTAGTCTTACTGATGTCAG 0 2 5' arm Bos_taurus mirnest mir-22 2e-38 eca-mir-22 1e-39 -30.5 .(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))). (-30.5)