mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAAAGTTCGTTCAGGTTTTT GAATCTGGATGAACTTTTTGG AGACATACTATTGGGCTGGCCAAAAAGTTCGTTCAGGTTTTTCTGTACCAGCTTCCAGAAGAATCTGGATGAACTTTTTGGCCAACCCAATACATCTGG ATTTGGATGTGTTTTAGATCTTCACCAAGGAGAGTGCTGGCTGGCTTGCTTGCTTCCTTCTTTCCTTCTCTTCAGCCTCCCTTGTTCACTCTCACGCTTTCTTTCTTTTTGATGTGAGGGAGTAGGAGATTCTCCAGAGCTCCGACAAAGACATACTATTGGGCTGGCCAAAAAGTTCGTTCAGGTTTTTCTGTACCAGCTTCCAGAAGAATCTGGATGAACTTTTTGGCCAACCCAATACATCTGGCTAACCTGGAAAGGTCCCCACCCCAATCCACACACACCTCTTACTCAGAATC 0 0 5' arm Bos_taurus mirnest 100 bta-mir-2285d 0.00002 -49 ........(((((((.(((((((((((((((((((((((((((((..........))))))))))))))))))))))))))))).)))))))....... (-49)