mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAAAGTTCGTTCAAGTTTTC GGACCTGAATGAACTTTTTGG TTGAGTTGGCCAAAAAGTTCGTTCAAGTTTTCCGTAAGATATGATGAAGGACCTGAATGAACTTTTTGGCCAACCTA TATCGACCGGAGTTGTTTGAATTTTAGCTTACATAATATTGAGTTGGCCAAAAAGTTCGTTCAAGTTTTCCGTAAGATATGATGAAGGACCTGAATGAACTTTTTGGCCAACCTAGTAAATCACTGGCCACGGATGTTAGGTTCTGTAGAAATTCTCCAGTCAGTAATGTGTTAACAAGGAGGCCCAATTAGAGGAAGGTCAGGGTGTTGGGACATTATTTCAGGGGCACTGCAGAGCTGCAAGAATCTCTTAGTTCCTTTGTCTGTAAAGACTGTAGAATGAAAGGCTCTGCCTTAAGTCCTGAGAGCAGACTCTGGCAACTCTGTCCGTAAAATCCATCTCTCCATCAGTCTGTTCAGTAATGGGGTGCTCTGTCCCAAATTGGCTGCAGGAGATGAGTCACAAAGCATAAAGGGAAAGGAATAGGTGTTCTTTATTTCCAGCAATGAAAACACTCCTCGGCAGTGAAATTGGAGTGGTGGCCCCCCATCTTTAACTTTGGTCCTCGGGGATATTTGTTTGACTGTACCTGATAGCATCAGAAGTTCACCATGTGTTAAGTGCTGTTTCCCCAACACGTGTAAATCTTCTTTTCATAGCTCCCCAGAGAGCCGAAAGGATTTCCTGAAGGCTGTGCATTCCATCCTGCGAGATAAGCACAGAAGACAGCTCCTGAAGACCGAGAGCCTTCCCTCGTCCCAGCAATATGTCCCTTTCGGAGGAAAGCGGTTGTGTGCGCTGAAAGGGGCCAGGCCGGCTATGAGCAGGGCAGGTACTGTGGGGATTCAGACGTTCAAAATCCCCGT 2 0 5' arm Bos_taurus mirnest 100 bta-mir-2284b 0.0009 -36 ....(((((((((((((((((((((.(((((.(((........))).))))).)))))))))))))))))))))... (-36)