mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGCCCAAAAGTTCTTTTGG GAATGAACTTTTTGGCCAACC GCCACCCTTGTTTTTATTGGGTTGGCCCAAAAGTTCTTTTGGGTTTTCCCATAACATCTTATGGAAGGGACCTGAATGAACTTTTTGGCCAACCCAGTATTTAATCAGAAAA GATGCACACGCTGCGGCGCTGCCAACAGGAGGGCCAGGAGCTGCTGCGCCACAACCAGGAGCTGCACACCCGCCTGTCCGAGGAGATTGACCGGCTGCGCAGTTTCATCGCCTCTCAGGGGACGGGCAACGGCTGTGGTCGCAGCAGCGAGCGGAGCTCCTGTGAGCTGGAGGTGCTGCTGCGAGTGAAGGAGAACGAGCTGCAGTATCTGAAGAAGGAGGTGCAGTGCCTCCGAGATGAGCTCCAGATGATGCAGAAGGTGAGTCCTGGCCAGCTGAGGTGCCAGAGGGGTGGGGAGCCCCTGGATCCAGCTGTGCCCTCATCCTGTGATCACCTGTTCTGTGTCGGCCACTCCTGGCCTCATCAGGCCCTCCCTGTGCCTCCCCCATGTAGGGGTCAGTATTCCCATTTACAGACAAAGAAACTGAGGCTAAGAAAGGGTAAGTGATTTGCTCCAGGCCACCCTTGTTTTTATTGGGTTGGCCCAAAAGTTCTTTTGGGTTTTCCCATAACATCTTATGGAAGGGACCTGAATGAACTTTTTGGCCAACCCAGTATTTAATCAGAAAATATTTATTGAATACCTACTATGTGCTCAGCACTACTGGGTACTGGGTGACTTGCTGTGGACCAGACCAAAATCCCTGTCCTTGTGGAGTATGCATTCCAGTGTGGAGTATGCGTTCCCAGAAACCTGTGTTTCTGGGAGCTGGGGGACTGAGATTTGGGGCCCAATCTGACCCACCCTTGGTGCCGTGTCCATGTGTCTTTGACAACTCTCTGTGTGTTGGT 2 0 5' arm Bos_taurus mirnest 100 bta-mir-2284w 0.00008 -46.4 ......((.(((..(((((((((((((.((((((((.((((((((((.((((((....))))))..)))))))))).)))))))).)))))))))))))...))).)).... (-46.4)