mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GAGCCAAGGATGACTTGCCGG GGCAAGCATCCGAGGCTCTG AGAGTGGAAGTGAGCCAAGGATGACTTGCCGGCAGCTGCAGCAAGGCATTAAGGTTTAACTGGCCATAACTGGCAAGCATCCGAGGCTCTGTTTCACCCTCT 2 1 5' arm Vitis_vinifera pmrd MIR169_2 2e-45 vvi-MIR169m 4e-53 -46.2 ((.((((((..(((((..(((((.((((((((..((....))..(((....((......)).)))....)))))))))))))..)))))..)))))).)).. (-46.20)