mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGCATTCTGTCCACCTCC AGGTGGCCAGCATGCCAAAG CAGAGCCATTTTGGCATTCTGTCCACCTCCATGCACATCATGGGTCTATATTCTTTTGGAGGTGGCCAGCATGCCAAAGTGGCTCTGTA 2 0 5' arm Vitis_vinifera pmrd MIR394 3e-44 vvi-MIR394a 2e-45 -51.01 (((((((((((((((((.(((.(((((((((.........................))))))))).))).))))))))))))))))).. (-51.01)