mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTAGATTCACGCACAAACTCG AGTTTGTGCGTGAATCAAACC GCACATCTCAAGTTTGTGCGTGAATCAAACCCCATCGTAGCCGTCCATATCTTCGGGTACTAATCACGGGGCGATTCGACGGCGTTAGATTCACGCACAAACTCGTGAGTTCTGA 3 0 3' arm Vitis_vinifera pmrd MIR403 1e-50 vvi-MIR403a 7e-61 -48.3 .((...((((((((((((((((((((.(((.((.(((.(..(((((.((((....)))).........)))))..)))).)).))).))))))))))))))))..))))...)). (-48.30)