mature_miRNA	miRNA*	pre-miRNA	EST_contig	mismatches	bulges	arm	species	source_database	RFAM_best_hit	RFAM_lowest_evalue	miRBase_best_hit	miRBase_lowest_evalue	folding_energy	secondary_structure
AGGGCATGCTGCGTGCCATGG GTGGCCGCACTACGCCGCAT CGCGTGTGAGACCAAGGGCGCTGTGGCCGCACTACGCCGCATACTGAACCAGGAGCTGGCAGGGCTGGCTATGCGGAGGGCGGCTCCGTAGAGAACCTGCTGAACGCGCTGGCCAAGGAGCACTTTGATCGCATTGACAACGCGCCCGAGCGCCGGCGCACCGGCAAGAACAAGGACAAGTTTGAGATGCTGCCGTACCCCGGCAACACGCTCATGGATGAGGCTGACCTGAAGGGCATGCTGCGTGCCATGGCGCCCTTCATCAAGCACCT GCACGAGGGGCACGGTCACCAGGCACTGTAAAGCTAGAGGACGAGGCCTGCATGGACGACCAGAAGGTCAAGGCCTTCATGAAGCAGCACGGCCTTCCGCTCTGTATCCCCGAGCGCGAGCTGGGCAAGGGCGCATTCGGCCACGTGGAAATGGTGATCATCACCCTGCCTGACGGCACCACCATCAAGGCCGCACGCAAGACCCTGCACGCGTGTGAGACCAAGGGCGCTGTGGCCGCACTACGCCGCATACTGAACCAGGAGCTGGCAGGGCTGGCTATGCGGAGGGCGGCTCCGTAGAGAACCTGCTGAACGCGCTGGCCAAGGAGCACTTTGATCGCATTGACAACGCGCCCGAGCGCCGGCGCACCGGCAAGAACAAGGACAAGTTTGAGATGCTGCCGTACCCCGGCAACACGCTCATGGATGAGGCTGACCTGAAGGGCATGCTGCGTGCCATGGCGCCCTTCATCAAGCACCTGAACGCTCGCGGCTACATGCACTTCGACCTGAAGCCCGCCAACCTGCTATACGACATCGCGCCTGATGGCAGCAAGGTCTTCCGCGTGTGCGACTTCAACCTGGCAGTCAAGACCGACAGCAATGGCCGCGTCGCGCGCGCCCAGNGCGGCACGCACCCGCGGCTTCTGGGCGT 4 1 3' arm Chlamydomonas_reinhardtii mirnest  100 cre-MIR1163 3e-68 -97.1 .((...(((....((((((((((((((((((.((.(((.((((((...(((.((((.((((((.....((.(((((((.....))))))).))..))))))....((((((((...((.((...(((.((.....)))))...))))....))))))))...((((.((((........))))....))))((((.....)))).....)))).)))....)).))...))...))).)).)))).))))))))))))))..))).)).... (-97.1)