mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AACATTCAACGCTGTCGGTGA ATCGGCCGTTGACTGTACC CACTGGAGCCCCCAACTTGAGGGCTTCAGAGAACATTCAACGCTGTCGGTGAGTTTGAGAAAGTGTAAAAATATAAACCATCGGCCGTTGACTGTACCCTGAGGCTTTTCACAAAAATCCAATCTC TTAAGATGCAGAATAGAGAGGGATACAGATGCATATGCATAGAGAGAGACATCACAATGGGCTTTCTTGGAGGACTTTAAGACCAAAATATTGGATCCTTGCTGAAATCCGGTCGACAATCAGGTGAAAACCCATACCATCTACTATGTGCTTGGAAACCAACAATGATGTACTTATATGCTCAAACAGATTACAAACAGCAGGACACCCGTGTCTGTGAGGTACCATAGTAGTGCTGGAAAATAGGTGGAAAATAATACCCTGCATTAACCAAAATACGCTCTCTGAAGACATTAATCGAACTCCTGGAATGTGCGGGCCTCAGCAGATTTTCTGCCTCTCTGACGGCACTGGAGCCCCCAACTTGAGGGCTTCAGAGAACATTCAACGCTGTCGGTGAGTTTGAGAAAGTGTAAAAATATAAACCATCGGCCGTTGACTGTACCCTGAGGCTTTTCACAAAAATCCAATCTCACTA 3 2 5' arm Xenopus_tropicalis mirnest mir-181 0.00000000003 xtr-mir-181a-2 7e-49 -36.4 ..(((((((((.((...)).)))))))))...(((.((((((..(((((((.(((((................)))))))))))))))))).))).......((.((((....)))).))...... (-36.4)