mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAGAGATGGCTCAGCAGTT CTGCCTTGCTGTCCCTTTTCT TTGCTCACTGAGCTGCCTTGCTGTCCCTTTTCTGACAAACTCTATAGCTGGAGAGATGGCTCAGCAGTTAAGAGAGCT TCCTCAGATCTTTGCTCACTGAGCTGCCTTGCTGTCCCTTTTCTGACAAACTCTATAGCTGGAGAGATGGCTCAGCAGTTAAGAGAGCTGACTGCTCTTGCAGAGGACTGAGGTTCAATTCCCAGCACCCACATGGTGTTTTATAACCACCTCTGTAACTCCAGTTCTGGGGGATCTAATGCCCTCTTCTGATCTCTGCATATGCTAGGTATGCATGTGGTGACCACAGATACACATGCGGGCAAAACACCTATACACATAAAAGTGAATGATTTTTTTTAAAAGATTCAATATAGCTTATTCACTCACTCACTCACTCACTCACTCACTCACTCATTCATTCATTCAATAACCATGCCTACGACTGACCCTGAGCACTTGATTGTCACTAGCCTGCAGGTGGGTCAGGAGAGTTTCCCAGTGTGGCCTAAGAGGCTCCAGGAGCTTGCATCCCAGGAGTCACACAAGCCGGCCAAGATGACTACACTGGAAAGGTTCTGGGGATTGTGAAGAGAATCATTGCAGACCCAGAGATCCCCTAAGGAGAACATGGCCAGCCAGCCCCTATCATCTGTTTCTTACTGGGTCCTTGTGAACATCTTTTAGCCTGCTACAGCAAAGGCCACAGGGCCAGATGACTTTCTCTGCAACAGGCAAGTTCCAG 5 0 3' arm Rattus_norvegicus mirnest tRNA 0.000004 mmu-mir-3473 0.000004 -23.8 ..((((.((.((((((...((((((.((((.(((..........)))..)))).))))))...)))))).)).)))). (-23.8)