mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCACTCTGTAGACCAGGCTGG ATCTGCTTCTGCCTCGTGAGT AGTCCTAAAACTCACTCTGTAGACCAGGCTGGGCTAGAAATCCATCTGCTTCTGCCTCGTGAGTGCTGGGAT GCATGGACTTGACAGTTCGGTCCGGATTCCCGGGATAAATCCCCAACCCCGAAGGATCACTTTCTGAACAAGGAAGTATTTGGGGTTTTGTTTGTTTGTTTAATGGATATGGAAGTTTTCACTTGGAAAGATTGATTGCGTTCTGGAGACTTGCTCCACAGCAGTGTGGCTGAGCTTAACACCCCTGAAGCATACAGTCAGACCGATTAGGACAGTTAAAGGTACGTATAGCTTACCAAATCAAAAAAAAATTATTTTGGGGGGCTTTTTTCCCCCAAAAGAGTGTCTCTCTGTATAGTCCTAAAACTCACTCTGTAGACCAGGCTGGGCTAGAAATCCATCTGCTTCTGCCTCGTGAGTGCTGGGATCAAAAGTGTGAGCCCTGTAGGTCTTAAGTTCCAGTAATGAAGTCACCCAGCAGGGAAGTCCTCAGGGACAACACAGCAACACACCCAGGACATGGGCTCCCACCTCCTTGGCTTTCTCTGAGTGGCAAGTGTCCCTCCAAGAGAAGGGGAGGGGCTGAGGTGTCCATTGTGTGATCCTTGGATCTCAAGCCCTCACAGTAAATGGGGACCCATCCATCCTATCACGGGGCTGACATGCAGCTTTCCCCACTGCAGACCCAGGACGGAGCTATTGGCACCATGAACCCAGTCATCAGCATCACTCTCCTGCTTTCAGTCTTGCAGATGTCCCGAGGACAGAAGGTGATCAGCCTGACAGCCTGCCTGGTGAACCAGAACTTCGACTGGACTGCCGTCATGAGAATACACCACTTGCCCATCCGCATGAGTTCACCTGACCCGAGAGAGAAGAT 4 2 5' arm Rattus_norvegicus mirnest 100 mmu-mir-3470b 0.000003 -22.5 .((((((..((((((...(((((.((((.((((.......))))))))..)))))...))))))..)))))) (-22.5)