mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGAGGCAGAGGCAGGAGGA TGCCTGCTTCTGCCTCTCC GATTTGCTGAAGGAGGCAGAGGCAGGAGGATCACGAGTTCGAGGCCAGCCTGGGCTCCACATTTTACTCTGTAGACCACGCTGGCCTCAAACTCGCAGCATCTGCCTGCTTCTGCCTCTCCACTGCTTG GCCGGTTGTGGTGGCGCACACCGGTAGGATTTGCTGAAGGAGGCAGAGGCAGGAGGATCACGAGTTCGAGGCCAGCCTGGGCTCCACATTTTACTCTGTAGACCACGCTGGCCTCAAACTCGCAGCATCTGCCTGCTTCTGCCTCTCCACTGCTTGTAGTGC 1 0 5' arm Rattus_norvegicus mirnest Metazoa_SRP 0.00003 mmu-mir-1935 0.000006 -62.6 .....((....(((((((((((((((.((((..((((((.(((((((((.(((..((.(((........))).))))).))))))))).))))))....)))).))))))))))))))).....))... (-62.6)