mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATTTGGGGATGGGAGGGAGGA TTTCTACTCGACCAAAGTTT TATATTTCTACTCGACCAAAGTTTTGTAAGAAACAATACAGAATTTGGGGATGGGAGGGAGGAT GGATTAGCGTGGTCGCGGCCGAGGTACATCTTAACTGCCTTCTATTTTTAAAACCTAAGGTCGTTAGTTGGGCTTTACTGTTCTTGCTATCGTATGGCATACACATCTGCCTGGATATATTTCTACTCGACCAAAGTTTTGTAAGAAACAATACAGAATTTGGGGATGGGAGGGAGGATAT 4 1 3' arm Rattus_norvegicus mirnest 100 mmu-mir-1892 5e-23 -16.8 ....(((((.((((.((.((((((((((........))))))))))..)).)))).)))))... (-16.8)