mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCGCTCCTCCTTCTTCTTCCA GAAGACGAAGGAAGACGACG ATCATCTCCGAAGCAAGGCGAAGAAGACGAAGGAAGACGACGATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAGTCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCTC GGTTGGACTTAGACAGTTTCGGTCCGGAATCCCGGGATGAAAGCTTCGTCCCCACTCCTCCACACATCGCCAAAAAGCTTCTGCAGCATTCTCCCTCCCTCCCTCCCTCCCTCCATCATCTCCGAAGCAAGGCGAAGAAGACGAAGGAAGACGACGATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAGTCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCTCCGTCAGGCCCCCCGCCGCTCGTCCCGTTGCGGTTCGCTGCAAGACGGAGAACGGCTTCGCCGATGGCGGCGAGGAGTTGAGCCGACGAGACGTTCTTAAACTCGTCGGCGCTAGCGTCGGCATTGAACTGATGGCGAGCTCTGGATCATTCGTTGAATCGGCTCGTGCTGCTGATTTGATTCAACGCCGGCAGCGTTCCGAGTTTCTTTCAAATGTCAGGGGCACCTTTTTCACGGCTATAAAGGGAAATCCAGATCTCATCCCATCTTTACTGACGTTGGCATTAAATGATGCTATGACTTATGACAAGGCCTCAAAGTCTGGAGGCCCAAATGGATCCATAAGGTTCAGCTCAGAGATTAGCAGACCCGAGAATAAGGGCCTTTCAGCTGCCATGAACTTATTGGAGGAAGCTAAGAAGGAAATAGATTCATATTCCAAGGGCGGACCCATATCCTATGCAGATCTTATACAGTATGCAGCGCAGAGTGCACTCAAGGCTACCTTTCTAGCTTCAGCCATTCGCAAATGTGGTGGGAATGAAGAGAAAGGGGGCTTGCTCTACACTGCCTATGGTTCCAGCGGACAGTGGGGCTTTGTTGACAANNCATTTGGGAGG 4 1 3' arm Eucalyptus_globulus mirnest 100 100 -34.5 .((......)).(((((((((.(((((.((((((.((((((((((.((((.(((.....))).)))).)))).(((....((....))...))).....)))).)).)))))).)))))....)))))))..))...... (-34.5)