mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTATGCCCTAACCGCTCAGT TGGTGCGGAAAGGGCCCACAGT GGCCCATGGACTGGTGCGGAAAGGGCCCACAGTGGACTTGGTGCACTGTATGCCCTAACCGCTCAGTCCCTGGGT CCTGCAGACACACCATTCCCATGAGGCACTGCGGCCCATGGACTGGTGCGGAAAGGGCCCACAGTGGACTTGGTGCACTGTATGCCCTAACCGCTCAGTCCCTGGGTCTGGCATGACAGACAGAACATTTCCAGGGGAGTCAAGGGCACAGGATGAAGCCAGACAAGGCGAGGCAGGTGGGGCAGAATGAATGAGCTTTCTAGGGAGGGAGGTTGGGTGCAGGTAGAGCGAGGTTAAGCAGCTGGGGTGGTGAGCCAGCGAGGCACTGGCCTCCAGATTCCGTGGCCAAGGAGGGCCTTGCGGGCGGCGACGGAGCAGTGATCGGTGTCTCGGAGAGCTCGGACTGGAGACTAGGCCAGGTCTCTAGCAGAAGTGGATGTGCCTGCCAGTCACTGAAGGCAAGGATGACAGGTGTGGTCAACGTGATAGAAAGACATGACATGTTCCGGTGTGATGGAAAGGACATAAGGACAGTCATCCATCCTTCCTGAACACCGTGGGCTGGTGCCGTGGGACACTGCCTTAAAAGCCGCTTGTTCATTCTTTTGCCAATGAGCTAACACATCTCTGCTACTCTCTGGATTAACTTCCCCCTACCTTGGACCCCTCAAAATAAAGATATGGTGCAACCCACCTCATGTCGGGGCCTTTGAATACGGGGAACTTCTTATACCCACTATAGTTCTGA 4 1 3' arm Rattus_norvegicus mirnest mir-675 4e-18 rno-mir-675 8e-35 -40.4 .(((((.(((((((.((((..(((((..((((((.((...)).))))))..)))))..))))))))))).))))) (-40.4)