mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGTACCGTGAGTAATAATGCG CATTATTACTTTTGGTACGCG TGTCTTTGCCGGTGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGTGGTCAACAGCGCAGCA GGCCCCACCCTGACTCTGGCAGCCTGGAGCCGTGTCTTTGCCGGTGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGTGGTCAACAGCGCAGCACCGGGAGTGCATCGGACCTGGGAGTGGACAGCGTGGTGAGAGAGGAGGTGTACAAGCTGCAGGCCCGGGTTGATGTATTAGAACAGAAACTGCAGCTGGTGCTGGCCCCACTGCACAGCCTGGCCTCTCGGTCCCCGGAGCATGGGCTGCAAGATCCTGGCAGCCTGCTGGCCCACTCCTTCCAGCAGCTGGACCGGATTGACTCACTGAGCGAGCAGGTCTCCTTCCTGGAGGAACAGCTGGGGTCCTGCTCTTGCAAAAAAGACCTGTGATGGCTTCTCAGTGCCCATGTTGGATTGAGCTGTTACCCCTACGTCCCTTCTAGCCTGAGTTCAAGTGCTGTCCGGTGGTGCCTGTGAG 2 0 3' arm Rattus_norvegicus mirnest mir-126 4e-28 rno-mir-3567 1e-49 -31.8 ((.((.(((...((((.((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).)).))))...))).)))) (-31.8)