mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GAGGAAGGCTGAGCAGGATTT ATCTCAATCACTTTTTGAAC CAAATCTCAATCACTTTTTGAACAGCTTGGGGAATGGAAACATTCTGGTGTGGAAGAGGAAGGCTGAGCAGGATTT CGGCCGGGGGAGTAAAGCAAATTTTTTTGGTTGGTTCAATGGGCGGAACAAATCTCAATCACTTTTTGAACAGCTTGGGGAATGGAAACATTCTGGTGTGGAAGAGGAAGGCTGAGCAGGATTTGG 5 1 3' arm Eucalyptus_gunnii mirnest 100 100 -16.7 .((((((...(((((((((..(((.((...((((((....)))))))))))......)))))).)))...)))))) (-16.7)