mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCATCATCATCATCTCTC TTGGTGATCATCATGGGGACA TCATTCTAGCATCATCATCATCATCATCTCTCTCTCTCTCTCTCTCTCTCAGGTTGGTGATCATCATGGGGACACAGGC CGGCCGGGGCTCCTTTTTTCATTCTAGCATCATCATCATCATCATCTCTCTCTCTCTCTCTCTCTCTCAGGTTGGTGATCATCATGGGGACACAGGCCAAAGCAGATGCAGAGGAGGAGACCAATATGGCAGCTTGGCTTCTGGGTGTCAAGAACCTCAAAATTCAACCCTACCATCTCCCTCCTCTTGGCCCTCACCATGTTAAGGTCCAGGTAAAGGCTCTTGGTATCTGTGGAAGTGATGTTCATCACTTCAAGTCAATGCGGTGTGCAAACTTCATCGTCAAGAAGCCTATGGTAATAGGCCATGAGTGTGCTGGGATCATAGAAGAAGTTGGGACTGAGGTGAAGTCTCTGGTTGTTGGTGACCGTGTAGCCTTGGAGCCCGGAATCAGTTGTGGCAGATGCCGTCACTGCAAAGATGGCCGCTATAATCTTTGCCCAGAAATGAAATTCTTCGGATCTCCACCAACTAATGGTTCGCTTGCCAATAAGGTGGTGCATCCTGCACATCTGTGTTACAAGCTACCGGAAAATGTGAGCTTGGAGGAAGGAGCAATGTGCGAACCCCTCAGTGTTGGTGTACACGCTTGTCGCCGAGCAAATATCAATCCTGAGACCAACATACTCATAATAGGATCAGGGCCAATTGGCCTTGTTACCTTATTAGCAGCCCGTGCTTTTGGAGCTCCGAGAA 5 0 5' arm Eucalyptus_gunnii mirnest 100 100 -10 ...........((.((((.((.((((((..(((.................)))..)))))).)).)))).))....... (-10)