mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGTACAAAGTTGAGTCACTT GTGACTTAACTTTGTACTAGT CCAAAATGAGTGACTTAACTTTGTACTAGTATTAGTGACTCAACTTCGTACTAATACATTGTACTAGTACAAAGTTGAGTCACTTATTTTGGGACGGAAGGAGT CCAAAATGAGTGACTTAACTTTGTACTAGTATTAGTGACTCAACTTCGTACTAATACATTGTACTAGTACAAAGTTGAGTCACTTATTTTGGGACGGAAGGAGTACAATCGTATCTACCACCCTCAGTTTTCCTGTGCCACTCACACCCAATATACGTTCCTCGCAAGTCTTGCTATTGTGCCATATCCATTTCAAACTGTACTACATTCTCATTCCACAAGCTGCTGGCCAAGGACCTCTCGTAGAAAGTTACCTCACCATCCAGTTTCACCCCAATGGCAGCCATGCTTCGTGTCCCGTATCTTGCCTGTCCCTTTTTTGTGTCGATGAATATAGAGCTCAACTGGTATTCCCAGTCAGGATCCACGCCAGTGTCAGGCACCGCAGATCTGTCAGCCTTGACCGTATCTGTCATCAGTTCTTCAACCATCTGCTTCAAAGAGACTTCTGCGTCATCATGTGCTGCAAGAAATCTGTTGAAGCTCTGTCCCAAGCGCAACACCTTTGGCCAAGGGGAGTCAATAGCAGCATTAGAAAGCACATGACACCCAGGAGAAACTGTTTGAACCACAGGAGCGTCACCTGGCTTATTAGAGATGTACACCATGGTTCCTGAATGCACATCAGCCAATACAAGATTAAAACCATTGTACTGATCTGCTTCCTTTGCAATTTCAGTTGCATACTCCAATGGACCCTGCCTGCCCTGGAGA 0 0 3' arm Triticum_aestivum mirnest MIR1122 0.000000000002 tae-MIR1137 0.0003 -44.2 (((((((((((((((((((((((((((((((((((((...........))))).......))))))))))))))))))))))))))))))))............ (-44.2)