mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGTATAAAGTTGAGTCATCT ATGACTCAACTTTGTATTAAC GTTCCAAAATAGATGACTCAACTTTGTATTAACTTTATACTAAAGTTAGTATAAAGTTGAGTCATCTATTTTATAG GTGTTGACATTTCTAACTGAGGTTGAACAATACTACTCCCTCCGTTCCCTCCGTTCCAAAATAGATGACTCAACTTTGTATTAACTTTATACTAAAGTTAGTATAAAGTTGAGTCATCTATTTTATAGAACGGAGGGAGTACTAACTAAAACTCCGTTCAGAAAATGAAANCACATTTGCCTATCTAGATTCAAACTACAAAAANTCATTTCCAATAACAAGCATTCTCATGCAGCATACAGTCCCAGGCTAATATGATTAAATAACAACCGGANATTCTCAAAACCAAGCCAAAACAAAGCCAACCACAGACNAATACATGGGTAGACAATANCTCAAACAAATCCCGATCAAATTCNGCTTCNTAACTTGACGNATTTCAACTTCNGGAATATTGTNCCAAACTTTAATCCTTTTCCCCGATTNAATAAAAGGAACCCCCGGANGNGTCATCTGCCAAGCCTTGAATCCTCAAAAAANNNGCTGGGCAAGCCTCCCTGCTCTCNTAANATNAACGTGCCTGATGGGGCCANANATACCAGNCCCCTTCGCCGANTTGCTNACCCACGNATNTTCCAATCCAGCAAGTTTCCGGAGGAATCTAGGA 0 0 3' arm Triticum_aestivum mirnest MIR1122 1.0E-24 tae-MIR1137 9.0E-10 -38.1 .....((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))).... (-38.1)