mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGTACAAAGTTGAGACATTT GTGTCTCAAACTCTATACTACT CGTCTTATATAAGTGTCTCAAACTCTATACTACTTTATAGTAAAGGTAGTACAAAGTTGAGACATTTATTTTGGGA CCACGCTTCCGCGATCGGAGCACGAGGACACTGACATGGACTGAACCGATAGAAACTTACACTCACGAGCATCGTTGAGGCAACGATGGCCGGTCATCGACAATCGTTGGCAGCGGCTTCTCTGAAGCTCCCAGCTCTTCTGCTTCTGTGGATCTTTAGCTTGAACTGGGGGCATGCCGTCGCGCACTTTGATCCTGCAAACATGACGGAACTGCAGAAACATGTCTCCTTTTTCGACCGCAACAAGGATGGCTTCATCACTCCTGTGGAAACCATCCAAGGGTTTGTTGCAATCGGTTGCGAGTATGCATTTGCTACTGCTGCCTCAGCCTCCATTCATGGTGCCCTTGCTCCTCAAACAACCCCGGCTGGCACACCACTGCCTCACTTGACAATATACGTGGAGAATATCCACAAAGCTATGCATGGAAGTGATTCGGGTGTATACGATCCTAAAGGAAGGTTTCTTCCCCAAAAGTTTGAGGAATTATTCAAAACATATGCAATACTCCGGCCAGATGCGTTGACACTTGCAGAGATGCATGCGATGCTCTTTGCTAAACGAGATCTAGACCCGATATCATGGGCGCCACCCGAGATAGAGTGGGGGCTATTATTCACGCTTGCAAGCGATTGGCTTGGATTTCTTCACAAGGACAGTGTTAGAGGTATATACGATGGAAGCGTGTTTACCAAGTTGGAGAAGAAATGGCACCCTTCTCAAAGTGATATATGATGAACTTGATGTAAATGTGGGACCACATACAAGCGACGGAGAAGGCCAANTTCTTCCACACTAGGAGAACATGTCACTGCAGGCAACCACCCAANNTTGAATACATATAGTATCTCTANTTACCATAGTTTATACCCACCCTCCCGTCTTATATAAGTGTCTCAAACTCTATACTACTTTATAGTAAAGGTAGTACAAAGTTGAGACATTTATTTTGGGATGGAGGAAGTATTAGTTTAAAGTAGGAGTTGGNATATGAAAAGGTCGTCCCCGAGAAGGTTTTCTACTATCTCCAATTCAACTAAAGTTTTTCTTTTCCCTCCAAGTGTAATTGT 5 1 3' arm Triticum_aestivum mirnest MIR1122 0.00000000007 100 -25.7 ..(((((.(((((((((((((......(((((((((......))))))))).....)))))))))))))..))))) (-25.7)