mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGTCGCAGGTATGGATGTATCTA AATACATCCATCCTGCGACGAGT TTGATATCATTCTCCCTCCGTCCTGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTNTTTAGTCTAAATACATCCATCCTGCGACGAGTAATTTGGAAGGGAGGGAGTACCAGTAAC ATATAACCAAACATGAGCAAATCATGCGAATAAAGCTAATTAAGGACCTGACATGGAACCTGTGATTTTTGTTTTTACAGTTGTTGTGGTCTTCTACAAAGCAGCGCTTCAAGCGAAGCTTGAACAAAGAATGACATGTACACCACTCCAACATTATATATATCCCTGACAAGATGGTGGATCATCATGTTGAGGACTGAAGGAGGACGCCGACATCGTCCCCCATCAGCCCGAGCGCTTCCCCGACGGCGTGCCAGGTGGCGGCGAGCGAAGCGGAAGCAGATGGTTTGTCCTTCAAGTAAGGCACAATGTGTTTCCTCATGTCACTGTTGGAGATGCCCAGGTGGCCTCCTGGCACCGACACGAACTTGACTCGCCCGGCCTCGTCCAGGGTCTTCAGACCAATCCAGTCTTCTTGATATAGCTTTGTCTGCTGAGGAGGTAGGACTGGCTCAAAGGCTCCATCAGGATAATAACCAAACCATGAAGTTTCCCGGGGTATGACGACGATATCATTCTCAAACTGCACATCATATTATGGGAAAATAGTTAAGGGCATCATAGGCGAAGTACATTTTGATATTTCTTGCCAACTTATACTGTGCACTATATACTTGCCAAACATTTTGATATCATTCTCCCTCCGTCCTGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTNTTTAGTCTAAATACATCCATCCTGCGACGAGTAATTTGGAAGGGAGGGAGTACCAGTAACTT 1 1 5' arm Triticum_aestivum mirnest MIR1122 0.000000000000002 tae-MIR1136 8e-27 -60.8 ...........((((((((.(((.(((((((((((((((((.((((((((((.(((((.......))))).))))))))))))))))))))))))))))))..)))))))).......... (-60.8)