mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATTATGGAACGGAGGGAGTA CCCCCTCCGTTTATAATTCT CATAACCAACTACCCCCTCCGTTTATAATTCTTGTCATGGTTTTAGTTCAAACGACAAGAATTATGGAACGGAGGGAGTACTTGCTATG CTTCTGTTTCTGCCTTTTAGATTTTACAACACTTCATAACCAACTACCCCCTCCGTTTATAATTCTTGTCATGGTTTTAGTTCAAACGACAAGAATTATGGAACGGAGGGAGTACTTGCTATGTTTTCTGTTTGCACTATTACATTTTTTGCTGGCTCTACTTTATGTATCATCAGGTATAACAGCAAAATATTATTTCAGGGAATGTACTCCACGGCGTCTTCGTGATGATCTATTGGATTCAGTTTTGCGAACACCAAGACACAAGGTCTCGCCAGCCATGAGCCTTTTGCAGGGATACTATGGTCTCACACCACCTCCAAAGAGGAACCCGACACAGGAAGGCACCGAGATAGCAGTATATGGAAAAGGCAAGTCAATTTCCTTGGTTGATGAACCCTGGTCTGCAGAGACACCAAATCCCAACACGTTCATGTTTGAGCATAGGAAACCCAGAAGCCAGACAATAGGTTCTCTTGTGAATGGCGAGTCTGAGGAGAATGGAGACGGCGAAAGGCCAGTAAGGAGGCGCCCGAAAGCTGACGGCGAGTTGCTACCTAAGGAGGAAAATGGCAGCGCCTTGTTGTCACGGGCGGGGAAAGGCCTCGCATTGAGGCCAAAGTCGGGCACTCGACCANACATGAACAAGAGCCATCANAATCTTATCNCGATGTCGGAA 1 1 3' arm Triticum_aestivum mirnest MIR1122 0.000000001 bdi-MIR5175b 0.00002 -33 ((((..(((.(((.((((((((((((((((((((((...((((......)))))))))))))))).)))))))))).))).))).)))) (-33)